EI/VirtualLeaf Changeset - fc4e80bf722d · Centrum Wiskunde & Informatica (CWI)

Changeset - fc4e80bf722d

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Michael Guravage - 15 years ago 2010-10-13 12:26:59
michael.guravage@cwi.nl

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@@ @@ -460,6 +460,150 @@ QString SimPluginInterface::DefaultLeafM @@
 pointer has been assigned.</p>
 </div>
 </div>
 <div class="section" id="wednesday-6-october-2010">
 <h1>Wednesday 6 October 2010</h1>
 <p>Wrote Simon van Mourik about his missing libiconv-2.dll.</p>
 </div>
 <div class="section" id="thursday-7-october-2010">
 <h1>Thursday 7 October 2010</h1>
 <p>Added a Q3FileDialog in <tt class="docutils literal"><span class="pre">canvas.cpp:Main::exportCellData(void)</span></tt> to
 choose where to write the exported cell data.</p>
 </div>
 <div class="section" id="friday-8-october-2010">
 <h1>Friday 8 October 2010</h1>
 <p>Added new parameters to control perodic cell exprt data.</p>
 <p>Added code to relize perodic cell export.</p>
 </div>
 <div class="section" id="monday-11-october-2010">
 <h1>Monday 11 October 2010</h1>
 <div class="section" id="mercurial-hooks">
 <h2>Mercurial hooks</h2>
 <p>Tried several alternatives for Mercurial's <tt class="docutils literal">pretxnchangegroup.forbid_2heads</tt> hook.</p>
 <ol class="arabic simple">
 <li><a class="reference external" href="http://bitbucket.org/dgc/headcount">http://bitbucket.org/dgc/headcount</a>: <strong>Headcount</strong> <tt class="docutils literal">ui</tt> complains of a missing data member</li>
 <li><a class="reference external" href="http://stackoverflow.com/questions/1705921/useful-mercurial-hooks">http://stackoverflow.com/questions/1705921/useful-mercurial-hooks</a>: <strong>forbid2_heads.py</strong> doesn't load</li>
 <li><a class="reference external" href="http://davidherron.com/node/961">http://davidherron.com/node/961</a>: <strong>forbid2_heads.sh</strong> works as advertised</li>
 </ol>
 </div>
 <div class="section" id="mercurial-repositories">
 <h2>Mercurial Repositories</h2>
 <p>Tried to install Rhode Code from: <a class="reference external" href="http://packages.python.org/RhodeCode">http://packages.python.org/RhodeCode</a>.</p>
 <ol class="arabic simple">
 <li><a class="reference external" href="http://bitbucket.org/marcinkuzminski/rhodecode">http://bitbucket.org/marcinkuzminski/rhodecode</a></li>
 <li><a class="reference external" href="http://packages.python.org/RhodeCode">http://packages.python.org/RhodeCode</a>, <a class="reference external" href="http://pypi.python.org/pypi/RhodeCode/1.0.0rc3">http://pypi.python.org/pypi/RhodeCode/1.0.0rc3</a></li>
 <li><a class="reference external" href="http://hg.python-works.com">http://hg.python-works.com</a> (demo,demo)</li>
 <li><a class="reference external" href="http://bitbucket.org/bfrog/cutehg">http://bitbucket.org/bfrog/cutehg</a></li>
 <li><a class="reference external" href="http://pypi.python.org/pypi/SIP">http://pypi.python.org/pypi/SIP</a>, <a class="reference external" href="http://www.riverbankcomputing.com/hg/sip">http://www.riverbankcomputing.com/hg/sip</a></li>
 <li><a class="reference external" href="http://pypi.python.org/pypi/PyQt">http://pypi.python.org/pypi/PyQt</a></li>
 <li><a class="reference external" href="http://ask.github.com/celery">http://ask.github.com/celery</a></li>
 </ol>
 <p>All goes tolerably until you tick in the url; at which point RhodeCode complains that:</p>
 <pre class="literal-block">
 Exception happened during processing of request from ('127.0.0.1', 35803)
 Traceback (most recent call last):
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py&quot;, line 1068, in process_request_in_thread
    self.finish_request(request, client_address)
  File &quot;/ufs/guravage/opt/Python-2.6.2/lib/python2.6/SocketServer.py&quot;, line 320, in finish_request
    self.RequestHandlerClass(request, client_address, self)
  File &quot;/ufs/guravage/opt/Python-2.6.2/lib/python2.6/SocketServer.py&quot;, line 615, in __init__
    self.handle()
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py&quot;, line 442, in handle
    BaseHTTPRequestHandler.handle(self)
  File &quot;/ufs/guravage/opt/Python-2.6.2/lib/python2.6/BaseHTTPServer.py&quot;, line 329, in handle
    self.handle_one_request()
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py&quot;, line 437, in handle_one_request
    self.wsgi_execute()
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py&quot;, line 287, in wsgi_execute
    self.wsgi_start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/cascade.py&quot;, line 130, in __call__
    return self.apps[-1](environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/registry.py&quot;, line 379, in __call__
    app_iter = self.application(environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/RhodeCode-1.0.0rc1-py2.6.egg/rhodecode/lib/middleware/https_fixup.py&quot;, line 33, in __call__
    return self.application(environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/middleware.py&quot;, line 163, in __call__
    self.app, new_environ, catch_exc_info=True)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/util.py&quot;, line 48, in call_wsgi_application
    app_iter = application(environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/WebError-0.10.2-py2.6.egg/weberror/errormiddleware.py&quot;, line 156, in __call__
    return self.application(environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/RhodeCode-1.0.0rc1-py2.6.egg/rhodecode/lib/middleware/simplehg.py&quot;, line 55, in __call__
    return self.application(environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Beaker-1.5.4-py2.6.egg/beaker/middleware.py&quot;, line 152, in __call__
    return self.wrap_app(environ, session_start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Routes-1.12.3-py2.6.egg/routes/middleware.py&quot;, line 131, in __call__
    response = self.app(environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/wsgiapp.py&quot;, line 98, in __call__
    self.setup_app_env(environ, start_response)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/wsgiapp.py&quot;, line 203, in setup_app_env
    pylons_obj.translator = _get_translator(lang, pylons_config=self.config)
  File &quot;/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/i18n/translation.py&quot;, line 165, in _get_translator
    raise LanguageError('IOError: %s' % ioe)
 LanguageError: IOError: [Errno 2] No translation file found for domain: 'rhodecode'
 </pre>
 </div>
 <div class="section" id="re-install">
 <h2>RE-INSTALL</h2>
 <blockquote>
 <ol class="arabic simple">
 <li>easy_install mercurial</li>
 <li>mkdir src</li>
 <li>cd src</li>
 <li>hg clone <a class="reference external" href="http://www.riverbankcomputing.com/hg/sip">http://www.riverbankcomputing.com/hg/sip</a></li>
 <li>cd sip</li>
 <li>python build.py prepare</li>
 <li>python configure.py</li>
 <li>make</li>
 <li>make install</li>
 </ol>
 </blockquote>
 <div class="system-message">
 <p class="system-message-title">System Message: WARNING/2 (<tt class="docutils">v1.rst</tt>, line 295)</p>
 Block quote ends without a blank line; unexpected unindent.</div>
 <ol class="arabic simple" start="10">
 <li>cd ..</li>
 <li>curl <a class="reference external" href="http://www.riverbankcomputing.com/static/Downloads/PyQt4/PyQt-x11-gpl-4.7.7.tar.gz">http://www.riverbankcomputing.com/static/Downloads/PyQt4/PyQt-x11-gpl-4.7.7.tar.gz</a></li>
 <li>tar xzf PyQt-x11-gpl-4.7.7</li>
 <li>cd PyQt-x11-gpl-4.7.7</li>
 <li>python configure.py</li>
 <li>make</li>
 <li>make install</li>
 <li>cd ..</li>
 <li>hg clone <a class="reference external" href="https://litsol&#64;bitbucket.org/bfrog/cutehg">https://litsol&#64;bitbucket.org/bfrog/cutehg</a></li>
 <li>cd cutehg</li>
 <li>python setup.py build</li>
 <li>python setup.py install</li>
 </ol>
 <div class="system-message">
 <p class="system-message-title">System Message: WARNING/2 (<tt class="docutils">v1.rst</tt>, line 307)</p>
 Enumerated list ends without a blank line; unexpected unindent.</div>
 <p>22. cd ..
 . easy_install rhodecode, <a class="reference external" href="http://pypi.python.org/pypi/RhodeCode/1.0.0rc2">http://pypi.python.org/pypi/RhodeCode/1.0.0rc2</a></p>
 <p>This procedure fails as before.</p>
 <p>However, upon inspection I saw that the i18n directory was missing
 from my build but present in the rhodecode clone from bitbucket. While
 I think that the <tt class="docutils literal">easy_install rhodecode</tt> invocation is necessary to
 install the various subsidiary packages, moving the cloned rhodecode
 into the site-packages directory seems to have made most functionality
 work. e.g. graphical logs and diff highlighting.</p>
 </div>
 </div>
 <div class="section" id="tuesday-12-october-2010">
 <h1>Tuesday 12 October 2010</h1>
 <div class="section" id="rhodecode">
 <h2>RhodeCode</h2>
 <p>I think that if Chris can install RhodeCode, I can serve individual
 instance from my home directory.</p>
 </div>
 <div class="section" id="sed-ml-l1v1rc1">
 <h2>SED-ML L1V1RC1</h2>
 <p>Walking through the new SED-ML schema I see that they've dropped the
 generic simulation class and added AddXML and RemoveXML model change
 classes. Adding several more SED-ML examples for the symposium might
 still be justified - though they become obsolete the moment I
 introduce the new schema changes.</p>
 </div>
 </div>
 </div>
 <div class="footer">
 <hr class="footer" />

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doc/v1.rst

➞

Show inline comments

@@ @@ -198,3 +198,150 @@ Thursday 7 October 2010 @@
 Added a Q3FileDialog in ``canvas.cpp:Main::exportCellData(void)`` to
 choose where to write the exported cell data.
 Friday 8 October 2010
 ---------------------
 Added new parameters to control perodic cell exprt data.
 Added code to relize perodic cell export.
 Monday 11 October 2010
 ----------------------
 Mercurial hooks
 +++++++++++++++
 Tried several alternatives for Mercurial's ``pretxnchangegroup.forbid_2heads`` hook.
 . http://bitbucket.org/dgc/headcount: **Headcount** ``ui`` complains of a missing data member
 . http://stackoverflow.com/questions/1705921/useful-mercurial-hooks: **forbid2_heads.py** doesn't load
 . http://davidherron.com/node/961: **forbid2_heads.sh** works as advertised
 Mercurial Repositories
 ++++++++++++++++++++++
 Tried to install Rhode Code from: http://packages.python.org/RhodeCode.
 . http://bitbucket.org/marcinkuzminski/rhodecode
 . http://packages.python.org/RhodeCode, http://pypi.python.org/pypi/RhodeCode/1.0.0rc3
 . http://hg.python-works.com (demo,demo)
 . http://bitbucket.org/bfrog/cutehg
 . http://pypi.python.org/pypi/SIP, http://www.riverbankcomputing.com/hg/sip
 . http://pypi.python.org/pypi/PyQt
 . http://ask.github.com/celery
 All goes tolerably until you tick in the url; at which point RhodeCode complains that::
  Exception happened during processing of request from ('127.0.0.1', 35803)
  Traceback (most recent call last):
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 1068, in process_request_in_thread
     self.finish_request(request, client_address)
   File "/ufs/guravage/opt/Python-2.6.2/lib/python2.6/SocketServer.py", line 320, in finish_request
     self.RequestHandlerClass(request, client_address, self)
   File "/ufs/guravage/opt/Python-2.6.2/lib/python2.6/SocketServer.py", line 615, in __init__
     self.handle()
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 442, in handle
     BaseHTTPRequestHandler.handle(self)
   File "/ufs/guravage/opt/Python-2.6.2/lib/python2.6/BaseHTTPServer.py", line 329, in handle
     self.handle_one_request()
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 437, in handle_one_request
     self.wsgi_execute()
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py", line 287, in wsgi_execute
     self.wsgi_start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/cascade.py", line 130, in __call__
     return self.apps[-1](environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Paste-1.7.5.1-py2.6.egg/paste/registry.py", line 379, in __call__
     app_iter = self.application(environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/RhodeCode-1.0.0rc1-py2.6.egg/rhodecode/lib/middleware/https_fixup.py", line 33, in __call__
     return self.application(environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/middleware.py", line 163, in __call__
     self.app, new_environ, catch_exc_info=True)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/util.py", line 48, in call_wsgi_application
     app_iter = application(environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/WebError-0.10.2-py2.6.egg/weberror/errormiddleware.py", line 156, in __call__
     return self.application(environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/RhodeCode-1.0.0rc1-py2.6.egg/rhodecode/lib/middleware/simplehg.py", line 55, in __call__
     return self.application(environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Beaker-1.5.4-py2.6.egg/beaker/middleware.py", line 152, in __call__
     return self.wrap_app(environ, session_start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Routes-1.12.3-py2.6.egg/routes/middleware.py", line 131, in __call__
     response = self.app(environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/wsgiapp.py", line 98, in __call__
     self.setup_app_env(environ, start_response)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/wsgiapp.py", line 203, in setup_app_env
     pylons_obj.translator = _get_translator(lang, pylons_config=self.config)
   File "/ufs/guravage/.archive/mas/mr/rhodecode/lib/python2.6/site-packages/Pylons-1.0-py2.6.egg/pylons/i18n/translation.py", line 165, in _get_translator
     raise LanguageError('IOError: %s' % ioe)
  LanguageError: IOError: [Errno 2] No translation file found for domain: 'rhodecode'
 RE-INSTALL
 ++++++++++
 . easy_install mercurial
 . mkdir src
 . cd src
 . hg clone http://www.riverbankcomputing.com/hg/sip
 . cd sip
 . python build.py prepare
 . python configure.py
 . make
 . make install
 . cd ..
 . curl http://www.riverbankcomputing.com/static/Downloads/PyQt4/PyQt-x11-gpl-4.7.7.tar.gz
 . tar xzf PyQt-x11-gpl-4.7.7
 . cd PyQt-x11-gpl-4.7.7
 . python configure.py
 . make
 . make install
 . cd ..
 . hg clone https://litsol@bitbucket.org/bfrog/cutehg
 . cd cutehg
 . python setup.py build
 . python setup.py install
 . cd ..
 . easy_install rhodecode, http://pypi.python.org/pypi/RhodeCode/1.0.0rc2
 This procedure fails as before.
 However, upon inspection I saw that the i18n directory was missing
 from my build but present in the rhodecode clone from bitbucket. While
 I think that the ``easy_install rhodecode`` invocation is necessary to
 install the various subsidiary packages, moving the cloned rhodecode
 into the site-packages directory seems to have made most functionality
 work. e.g. graphical logs and diff highlighting.
 Tuesday 12 October 2010
 -----------------------
 RhodeCode
 +++++++++
 I think that if Chris can install RhodeCode, I can serve individual
 instance from my home directory.
 SED-ML L1V1RC1
 ++++++++++++++
 Walking through the new SED-ML schema I see that they've dropped the
 generic simulation class and added AddXML and RemoveXML model change
 classes. Adding several more SED-ML examples for the symposium might
 still be justified - though they become obsolete the moment I
 introduce the new schema changes.

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