diff --git a/src/parameter.cpp b/src/parameter.cpp --- a/src/parameter.cpp +++ b/src/parameter.cpp @@ -19,6 +19,9 @@ * */ +// Do not edit. All edits will be discarded. + + #include "parameter.h" #include #include @@ -183,40 +186,44 @@ Parameter::Parameter() { b4 = false; dir1 = strdup("."); dir2 = strdup("."); + export_interval = 100; + export_fn_prefix = strdup("CELLDATA"); } Parameter::~Parameter() { - // destruct parameter object - // free string parameter - CleanUp(); +// destruct parameter object +// free string parameter +CleanUp(); } void Parameter::CleanUp(void) { if (arrowcolor) - free(arrowcolor); + free(arrowcolor); if (textcolor) - free(textcolor); + free(textcolor); if (cell_outline_color) - free(cell_outline_color); + free(cell_outline_color); if (D) - free(D); + free(D); if (initval) - free(initval); + free(initval); if (datadir) - free(datadir); + free(datadir); if (k) - free(k); + free(k); if (s1) - free(s1); + free(s1); if (s2) - free(s2); + free(s2); if (s3) - free(s3); + free(s3); if (dir1) - free(dir1); + free(dir1); if (dir2) - free(dir2); + free(dir2); + if (export_fn_prefix) + free(export_fn_prefix); } @@ -340,6 +347,8 @@ void Parameter::Read(const char *filenam dir2 = sgetpar(fp, "dir2", ".", true); if (strcmp(dir2, ".")) MakeDir(dir2); + export_interval = igetpar(fp, "export_interval", 100, true); + export_fn_prefix = sgetpar(fp, "export_fn_prefix", "CELLDATA", true); } const char *sbool(const bool &p) { @@ -356,18 +365,18 @@ void Parameter::Write(ostream &os) const if (arrowcolor) - os << " arrowcolor = " << arrowcolor << endl; + os << " arrowcolor = " << arrowcolor << endl; os << " arrowsize = " << arrowsize << endl; if (textcolor) - os << " textcolor = " << textcolor << endl; + os << " textcolor = " << textcolor << endl; os << " cellnumsize = " << cellnumsize << endl; os << " nodenumsize = " << nodenumsize << endl; os << " node_mag = " << node_mag << endl; os << " outlinewidth = " << outlinewidth << endl; if (cell_outline_color) - os << " cell_outline_color = " << cell_outline_color << endl; + os << " cell_outline_color = " << cell_outline_color << endl; os << " resize_stride = " << resize_stride << endl; os << " T = " << T << endl; os << " lambda_length = " << lambda_length << endl; @@ -423,12 +432,12 @@ void Parameter::Write(ostream &os) const os << " dt = " << dt << endl; os << " rd_dt = " << rd_dt << endl; if (datadir) { - QDir dataDir = QDir::home().relativeFilePath(datadir); - os << " datadir = " << dataDir.dirName().toStdString() << endl; - } - else { - os << "datadir = ." << endl; - } + QDir dataDir = QDir::home().relativeFilePath(datadir); + os << " datadir = " << dataDir.dirName().toStdString() << endl; + } + else { + os << "datadir = ." << endl; + } os << " movie = " << sbool(movie) << endl; os << " nit = " << nit << endl; os << " maxt = " << maxt << endl; @@ -457,1403 +466,1431 @@ void Parameter::Write(ostream &os) const os << " i5 = " << i5 << endl; if (s1) - os << " s1 = " << s1 << endl; + os << " s1 = " << s1 << endl; if (s2) - os << " s2 = " << s2 << endl; + os << " s2 = " << s2 << endl; if (s3) - os << " s3 = " << s3 << endl; + os << " s3 = " << s3 << endl; os << " b1 = " << sbool(b1) << endl; os << " b2 = " << sbool(b2) << endl; os << " b3 = " << sbool(b3) << endl; os << " b4 = " << sbool(b4) << endl; if (dir1) - os << " dir1 = " << dir1 << endl; + os << " dir1 = " << dir1 << endl; if (dir2) - os << " dir2 = " << dir2 << endl; + os << " dir2 = " << dir2 << endl; + os << " export_interval = " << export_interval << endl; + + if (export_fn_prefix) + os << " export_fn_prefix = " << export_fn_prefix << endl; } void Parameter::XMLAdd(xmlNode *root) const { - xmlNode *xmlparameter = xmlNewChild(root, NULL, BAD_CAST "parameter", NULL); - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "arrowcolor" ); - ostringstream text; + xmlNode *xmlparameter = xmlNewChild(root, NULL, BAD_CAST "parameter", NULL); +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "arrowcolor" ); + ostringstream text; - if (arrowcolor) - text << arrowcolor; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "arrowsize" ); - ostringstream text; + if (arrowcolor) + text << arrowcolor; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "arrowsize" ); + ostringstream text; text << arrowsize; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "textcolor" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "textcolor" ); + ostringstream text; - if (textcolor) - text << textcolor; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cellnumsize" ); - ostringstream text; + if (textcolor) + text << textcolor; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cellnumsize" ); + ostringstream text; text << cellnumsize; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "nodenumsize" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "nodenumsize" ); + ostringstream text; text << nodenumsize; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "node_mag" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "node_mag" ); + ostringstream text; text << node_mag; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "outlinewidth" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "outlinewidth" ); + ostringstream text; text << outlinewidth; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cell_outline_color" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cell_outline_color" ); + ostringstream text; - if (cell_outline_color) - text << cell_outline_color; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "resize_stride" ); - ostringstream text; + if (cell_outline_color) + text << cell_outline_color; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "resize_stride" ); + ostringstream text; text << resize_stride; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "T" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "T" ); + ostringstream text; text << T; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "lambda_length" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "lambda_length" ); + ostringstream text; text << lambda_length; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "lambda_celllength" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "lambda_celllength" ); + ostringstream text; text << lambda_celllength; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "target_length" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "target_length" ); + ostringstream text; text << target_length; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cell_expansion_rate" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cell_expansion_rate" ); + ostringstream text; text << cell_expansion_rate; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cell_div_expansion_rate" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "cell_div_expansion_rate" ); + ostringstream text; text << cell_div_expansion_rate; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "auxin_dependent_growth" ); - ostringstream text; - text << sbool(auxin_dependent_growth); - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "ode_accuracy" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "auxin_dependent_growth" ); + ostringstream text; +text << sbool(auxin_dependent_growth); +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "ode_accuracy" ); + ostringstream text; text << ode_accuracy; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "mc_stepsize" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "mc_stepsize" ); + ostringstream text; text << mc_stepsize; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "mc_cell_stepsize" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "mc_cell_stepsize" ); + ostringstream text; text << mc_cell_stepsize; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "energy_threshold" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "energy_threshold" ); + ostringstream text; text << energy_threshold; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "bend_lambda" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "bend_lambda" ); + ostringstream text; text << bend_lambda; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "alignment_lambda" ); + ostringstream text; + text << alignment_lambda; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rel_cell_div_threshold" ); + ostringstream text; + text << rel_cell_div_threshold; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rel_perimeter_stiffness" ); + ostringstream text; + text << rel_perimeter_stiffness; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "collapse_node_threshold" ); + ostringstream text; + text << collapse_node_threshold; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "morphogen_div_threshold" ); + ostringstream text; + text << morphogen_div_threshold; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "morphogen_expansion_threshold" ); + ostringstream text; + text << morphogen_expansion_threshold; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "copy_wall" ); + ostringstream text; +text << sbool(copy_wall); +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "source" ); + ostringstream text; + text << source; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "D" ); + xmlNode *xmlvalarray = xmlNewChild(xmlpar, NULL, BAD_CAST "valarray", NULL); { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "alignment_lambda" ); ostringstream text; - text << alignment_lambda; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rel_cell_div_threshold" ); - ostringstream text; - text << rel_cell_div_threshold; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rel_perimeter_stiffness" ); - ostringstream text; - text << rel_perimeter_stiffness; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "collapse_node_threshold" ); - ostringstream text; - text << collapse_node_threshold; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "morphogen_div_threshold" ); - ostringstream text; - text << morphogen_div_threshold; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "morphogen_expansion_threshold" ); - ostringstream text; - text << morphogen_expansion_threshold; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "copy_wall" ); - ostringstream text; - text << sbool(copy_wall); - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "source" ); - ostringstream text; - text << source; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << D[0]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "D" ); - xmlNode *xmlvalarray = xmlNewChild(xmlpar, NULL, BAD_CAST "valarray", NULL); - { - ostringstream text; - text << D[0]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[1]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[2]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[3]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[4]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[5]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[6]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[7]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[8]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[9]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[10]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[11]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[12]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[13]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << D[14]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } + ostringstream text; + text << D[1]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[2]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[3]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[4]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[5]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[6]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[7]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[8]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[9]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[10]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[11]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[12]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << D[13]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "initval" ); - xmlNode *xmlvalarray = xmlNewChild(xmlpar, NULL, BAD_CAST "valarray", NULL); - { - ostringstream text; - text << initval[0]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[1]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[2]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[3]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[4]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[5]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[6]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[7]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[8]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[9]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[10]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[11]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[12]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[13]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << initval[14]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } + ostringstream text; + text << D[14]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "initval" ); + xmlNode *xmlvalarray = xmlNewChild(xmlpar, NULL, BAD_CAST "valarray", NULL); + { + ostringstream text; + text << initval[0]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << initval[1]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << initval[2]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << initval[3]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << initval[4]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << initval[5]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k1" ); ostringstream text; - text << k1; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k2" ); - ostringstream text; - text << k2; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[6]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "r" ); ostringstream text; - text << r; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[7]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "kr" ); ostringstream text; - text << kr; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "km" ); - ostringstream text; - text << km; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[8]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "Pi_tot" ); ostringstream text; - text << Pi_tot; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[9]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "transport" ); ostringstream text; - text << transport; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "ka" ); - ostringstream text; - text << ka; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[10]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_prod" ); ostringstream text; - text << pin_prod; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[11]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_prod_in_epidermis" ); ostringstream text; - text << pin_prod_in_epidermis; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[12]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_breakdown" ); ostringstream text; - text << pin_breakdown; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_breakdown_internal" ); - ostringstream text; - text << pin_breakdown_internal; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[13]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1prod" ); ostringstream text; - text << aux1prod; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1prodmeso" ); - ostringstream text; - text << aux1prodmeso; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1decay" ); - ostringstream text; - text << aux1decay; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1decaymeso" ); - ostringstream text; - text << aux1decaymeso; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1transport" ); - ostringstream text; - text << aux1transport; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux_cons" ); - ostringstream text; - text << aux_cons; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux_breakdown" ); - ostringstream text; - text << aux_breakdown; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "kaux1" ); - ostringstream text; - text << kaux1; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << initval[14]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "kap" ); - ostringstream text; +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k1" ); + ostringstream text; + text << k1; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k2" ); + ostringstream text; + text << k2; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "r" ); + ostringstream text; + text << r; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "kr" ); + ostringstream text; + text << kr; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "km" ); + ostringstream text; + text << km; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "Pi_tot" ); + ostringstream text; + text << Pi_tot; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "transport" ); + ostringstream text; + text << transport; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "ka" ); + ostringstream text; + text << ka; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_prod" ); + ostringstream text; + text << pin_prod; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_prod_in_epidermis" ); + ostringstream text; + text << pin_prod_in_epidermis; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_breakdown" ); + ostringstream text; + text << pin_breakdown; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "pin_breakdown_internal" ); + ostringstream text; + text << pin_breakdown_internal; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1prod" ); + ostringstream text; + text << aux1prod; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1prodmeso" ); + ostringstream text; + text << aux1prodmeso; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1decay" ); + ostringstream text; + text << aux1decay; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1decaymeso" ); + ostringstream text; + text << aux1decaymeso; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux1transport" ); + ostringstream text; + text << aux1transport; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux_cons" ); + ostringstream text; + text << aux_cons; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "aux_breakdown" ); + ostringstream text; + text << aux_breakdown; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "kaux1" ); + ostringstream text; + text << kaux1; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "kap" ); + ostringstream text; text << kap; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "leaf_tip_source" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "leaf_tip_source" ); + ostringstream text; text << leaf_tip_source; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "sam_efflux" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "sam_efflux" ); + ostringstream text; text << sam_efflux; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "sam_auxin" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "sam_auxin" ); + ostringstream text; text << sam_auxin; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "sam_auxin_breakdown" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "sam_auxin_breakdown" ); + ostringstream text; text << sam_auxin_breakdown; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "van3prod" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "van3prod" ); + ostringstream text; text << van3prod; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "van3autokat" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "van3autokat" ); + ostringstream text; text << van3autokat; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "van3sat" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "van3sat" ); + ostringstream text; text << van3sat; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k2van3" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k2van3" ); + ostringstream text; text << k2van3; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "dt" ); + ostringstream text; + text << dt; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rd_dt" ); + ostringstream text; + text << rd_dt; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "datadir" ); + ostringstream text; + + if (datadir) { + QDir dataDir = QDir::home().relativeFilePath(datadir); + text << dataDir.dirName().toStdString(); + } +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "movie" ); + ostringstream text; +text << sbool(movie); +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "nit" ); + ostringstream text; + text << nit; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "maxt" ); + ostringstream text; + text << maxt; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "storage_stride" ); + ostringstream text; + text << storage_stride; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "xml_storage_stride" ); + ostringstream text; + text << xml_storage_stride; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rseed" ); + ostringstream text; + text << rseed; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "constituous_expansion_limit" ); + ostringstream text; + text << constituous_expansion_limit; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "vessel_inh_level" ); + ostringstream text; + text << vessel_inh_level; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "vessel_expansion_rate" ); + ostringstream text; + text << vessel_expansion_rate; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "d" ); + ostringstream text; + text << d; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "e" ); + ostringstream text; + text << e; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "f" ); + ostringstream text; + text << f; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "c" ); + ostringstream text; + text << c; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "mu" ); + ostringstream text; + text << mu; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "nu" ); + ostringstream text; + text << nu; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rho0" ); + ostringstream text; + text << rho0; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rho1" ); + ostringstream text; + text << rho1; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "c0" ); + ostringstream text; + text << c0; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "gamma" ); + ostringstream text; + text << gamma; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "eps" ); + ostringstream text; + text << eps; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k" ); + xmlNode *xmlvalarray = xmlNewChild(xmlpar, NULL, BAD_CAST "valarray", NULL); { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "dt" ); ostringstream text; - text << dt; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rd_dt" ); - ostringstream text; - text << rd_dt; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "datadir" ); - ostringstream text; - - if (datadir) { - QDir dataDir = QDir::home().relativeFilePath(datadir); - text << dataDir.dirName().toStdString(); - } - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "movie" ); - ostringstream text; - text << sbool(movie); - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "nit" ); - ostringstream text; - text << nit; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "maxt" ); - ostringstream text; - text << maxt; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "storage_stride" ); - ostringstream text; - text << storage_stride; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "xml_storage_stride" ); - ostringstream text; - text << xml_storage_stride; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rseed" ); - ostringstream text; - text << rseed; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "constituous_expansion_limit" ); - ostringstream text; - text << constituous_expansion_limit; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "vessel_inh_level" ); - ostringstream text; - text << vessel_inh_level; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "vessel_expansion_rate" ); - ostringstream text; - text << vessel_expansion_rate; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "d" ); - ostringstream text; - text << d; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "e" ); - ostringstream text; - text << e; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "f" ); - ostringstream text; - text << f; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "c" ); - ostringstream text; - text << c; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "mu" ); - ostringstream text; - text << mu; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[0]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "nu" ); ostringstream text; - text << nu; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[1]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << k[2]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rho0" ); + ostringstream text; + text << k[3]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { ostringstream text; - text << rho0; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[4]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << k[5]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << k[6]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "rho1" ); + ostringstream text; + text << k[7]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { ostringstream text; - text << rho1; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[8]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << k[9]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "c0" ); ostringstream text; - text << c0; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[10]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "gamma" ); ostringstream text; - text << gamma; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[11]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "eps" ); ostringstream text; - text << eps; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[12]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); + } + { + ostringstream text; + text << k[13]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "k" ); - xmlNode *xmlvalarray = xmlNewChild(xmlpar, NULL, BAD_CAST "valarray", NULL); - { - ostringstream text; - text << k[0]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[1]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[2]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[3]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[4]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[5]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[6]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[7]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[8]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[9]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[10]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[11]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[12]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[13]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - { - ostringstream text; - text << k[14]; - xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); - xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); - } - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i1" ); ostringstream text; - text << i1; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); + text << k[14]; + xmlNode *xmlval = xmlNewChild(xmlvalarray, NULL, BAD_CAST "val", NULL); + xmlNewProp(xmlval, BAD_CAST "v", BAD_CAST text.str().c_str()); } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i2" ); - ostringstream text; +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i1" ); + ostringstream text; + text << i1; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i2" ); + ostringstream text; text << i2; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i3" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i3" ); + ostringstream text; text << i3; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i4" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i4" ); + ostringstream text; text << i4; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i5" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "i5" ); + ostringstream text; text << i5; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "s1" ); - ostringstream text; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "s1" ); + ostringstream text; - if (s1) - text << s1; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "s2" ); - ostringstream text; + if (s1) + text << s1; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "s2" ); + ostringstream text; - if (s2) - text << s2; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "s3" ); - ostringstream text; + if (s2) + text << s2; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "s3" ); + ostringstream text; - if (s3) - text << s3; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b1" ); - ostringstream text; - text << sbool(b1); - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b2" ); - ostringstream text; - text << sbool(b2); - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b3" ); - ostringstream text; - text << sbool(b3); - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b4" ); - ostringstream text; - text << sbool(b4); - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "dir1" ); - ostringstream text; + if (s3) + text << s3; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b1" ); + ostringstream text; +text << sbool(b1); +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b2" ); + ostringstream text; +text << sbool(b2); +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b3" ); + ostringstream text; +text << sbool(b3); +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "b4" ); + ostringstream text; +text << sbool(b4); +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "dir1" ); + ostringstream text; - if (dir1) - text << dir1; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } - { - xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); - xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "dir2" ); - ostringstream text; + if (dir1) + text << dir1; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "dir2" ); + ostringstream text; - if (dir2) - text << dir2; - xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); - } + if (dir2) + text << dir2; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "export_interval" ); + ostringstream text; + text << export_interval; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} +{ + xmlNode *xmlpar = xmlNewChild(xmlparameter, NULL, BAD_CAST "par", NULL); + xmlNewProp(xmlpar, BAD_CAST "name", BAD_CAST "export_fn_prefix" ); + ostringstream text; + + if (export_fn_prefix) + text << export_fn_prefix; +xmlNewProp(xmlpar, BAD_CAST "val", BAD_CAST text.str().c_str()); +} } void Parameter::AssignValToPar(const char *namec, const char *valc) { QLocale standardlocale(QLocale::C); bool ok; - if (!strcmp(namec, "arrowcolor")) { - if (arrowcolor) { free(arrowcolor); } - arrowcolor=strdup(valc); - } - if (!strcmp(namec, "arrowsize")) { - arrowsize = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'arrowsize' from XML file.",valc); } - } - if (!strcmp(namec, "textcolor")) { - if (textcolor) { free(textcolor); } - textcolor=strdup(valc); - } - if (!strcmp(namec, "cellnumsize")) { - cellnumsize = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'cellnumsize' from XML file.",valc); } - } - if (!strcmp(namec, "nodenumsize")) { - nodenumsize = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'nodenumsize' from XML file.",valc); } - } - if (!strcmp(namec, "node_mag")) { - node_mag = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'node_mag' from XML file.",valc); } - } - if (!strcmp(namec, "outlinewidth")) { - outlinewidth = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'outlinewidth' from XML file.",valc); } - } - if (!strcmp(namec, "cell_outline_color")) { - if (cell_outline_color) { free(cell_outline_color); } - cell_outline_color=strdup(valc); - } - if (!strcmp(namec, "resize_stride")) { - resize_stride = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'resize_stride' from XML file.",valc); } - } - if (!strcmp(namec, "T")) { - T = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'T' from XML file.",valc); } - } - if (!strcmp(namec, "lambda_length")) { - lambda_length = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'lambda_length' from XML file.",valc); } - } - if (!strcmp(namec, "lambda_celllength")) { - lambda_celllength = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'lambda_celllength' from XML file.",valc); } - } - if (!strcmp(namec, "target_length")) { - target_length = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'target_length' from XML file.",valc); } - } - if (!strcmp(namec, "cell_expansion_rate")) { - cell_expansion_rate = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'cell_expansion_rate' from XML file.",valc); } - } - if (!strcmp(namec, "cell_div_expansion_rate")) { - cell_div_expansion_rate = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'cell_div_expansion_rate' from XML file.",valc); } - } - if (!strcmp(namec, "auxin_dependent_growth")) { - auxin_dependent_growth = strtobool(valc); - } - if (!strcmp(namec, "ode_accuracy")) { - ode_accuracy = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'ode_accuracy' from XML file.",valc); } - } - if (!strcmp(namec, "mc_stepsize")) { - mc_stepsize = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'mc_stepsize' from XML file.",valc); } - } - if (!strcmp(namec, "mc_cell_stepsize")) { - mc_cell_stepsize = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'mc_cell_stepsize' from XML file.",valc); } - } - if (!strcmp(namec, "energy_threshold")) { - energy_threshold = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'energy_threshold' from XML file.",valc); } - } - if (!strcmp(namec, "bend_lambda")) { - bend_lambda = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'bend_lambda' from XML file.",valc); } - } - if (!strcmp(namec, "alignment_lambda")) { - alignment_lambda = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'alignment_lambda' from XML file.",valc); } - } - if (!strcmp(namec, "rel_cell_div_threshold")) { - rel_cell_div_threshold = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rel_cell_div_threshold' from XML file.",valc); } - } - if (!strcmp(namec, "rel_perimeter_stiffness")) { - rel_perimeter_stiffness = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rel_perimeter_stiffness' from XML file.",valc); } - } - if (!strcmp(namec, "collapse_node_threshold")) { - collapse_node_threshold = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'collapse_node_threshold' from XML file.",valc); } - } - if (!strcmp(namec, "morphogen_div_threshold")) { - morphogen_div_threshold = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'morphogen_div_threshold' from XML file.",valc); } - } - if (!strcmp(namec, "morphogen_expansion_threshold")) { - morphogen_expansion_threshold = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'morphogen_expansion_threshold' from XML file.",valc); } - } - if (!strcmp(namec, "copy_wall")) { - copy_wall = strtobool(valc); - } - if (!strcmp(namec, "source")) { - source = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'source' from XML file.",valc); } - } - if (!strcmp(namec, "k1")) { - k1 = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'k1' from XML file.",valc); } - } - if (!strcmp(namec, "k2")) { - k2 = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'k2' from XML file.",valc); } - } - if (!strcmp(namec, "r")) { - r = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'r' from XML file.",valc); } - } - if (!strcmp(namec, "kr")) { - kr = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'kr' from XML file.",valc); } - } - if (!strcmp(namec, "km")) { - km = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'km' from XML file.",valc); } - } - if (!strcmp(namec, "Pi_tot")) { - Pi_tot = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'Pi_tot' from XML file.",valc); } - } - if (!strcmp(namec, "transport")) { - transport = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'transport' from XML file.",valc); } - } - if (!strcmp(namec, "ka")) { - ka = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'ka' from XML file.",valc); } - } - if (!strcmp(namec, "pin_prod")) { - pin_prod = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_prod' from XML file.",valc); } - } - if (!strcmp(namec, "pin_prod_in_epidermis")) { - pin_prod_in_epidermis = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_prod_in_epidermis' from XML file.",valc); } - } - if (!strcmp(namec, "pin_breakdown")) { - pin_breakdown = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_breakdown' from XML file.",valc); } - } - if (!strcmp(namec, "pin_breakdown_internal")) { - pin_breakdown_internal = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_breakdown_internal' from XML file.",valc); } - } - if (!strcmp(namec, "aux1prod")) { - aux1prod = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1prod' from XML file.",valc); } - } - if (!strcmp(namec, "aux1prodmeso")) { - aux1prodmeso = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1prodmeso' from XML file.",valc); } - } - if (!strcmp(namec, "aux1decay")) { - aux1decay = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1decay' from XML file.",valc); } - } - if (!strcmp(namec, "aux1decaymeso")) { - aux1decaymeso = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1decaymeso' from XML file.",valc); } - } - if (!strcmp(namec, "aux1transport")) { - aux1transport = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1transport' from XML file.",valc); } - } - if (!strcmp(namec, "aux_cons")) { - aux_cons = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux_cons' from XML file.",valc); } - } - if (!strcmp(namec, "aux_breakdown")) { - aux_breakdown = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux_breakdown' from XML file.",valc); } - } - if (!strcmp(namec, "kaux1")) { - kaux1 = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'kaux1' from XML file.",valc); } - } - if (!strcmp(namec, "kap")) { - kap = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'kap' from XML file.",valc); } - } - if (!strcmp(namec, "leaf_tip_source")) { - leaf_tip_source = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'leaf_tip_source' from XML file.",valc); } - } - if (!strcmp(namec, "sam_efflux")) { - sam_efflux = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'sam_efflux' from XML file.",valc); } - } - if (!strcmp(namec, "sam_auxin")) { - sam_auxin = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'sam_auxin' from XML file.",valc); } - } - if (!strcmp(namec, "sam_auxin_breakdown")) { - sam_auxin_breakdown = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'sam_auxin_breakdown' from XML file.",valc); } - } - if (!strcmp(namec, "van3prod")) { - van3prod = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'van3prod' from XML file.",valc); } - } - if (!strcmp(namec, "van3autokat")) { - van3autokat = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'van3autokat' from XML file.",valc); } - } - if (!strcmp(namec, "van3sat")) { - van3sat = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'van3sat' from XML file.",valc); } - } - if (!strcmp(namec, "k2van3")) { - k2van3 = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'k2van3' from XML file.",valc); } - } - if (!strcmp(namec, "dt")) { - dt = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'dt' from XML file.",valc); } - } - if (!strcmp(namec, "rd_dt")) { - rd_dt = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rd_dt' from XML file.",valc); } - } - if (!strcmp(namec, "datadir")) { - if (datadir) { free(datadir); } - datadir=strdup(valc); - datadir = AppendHomeDirIfPathRelative(datadir); - } - if (!strcmp(namec, "movie")) { - movie = strtobool(valc); - } - if (!strcmp(namec, "nit")) { - nit = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'nit' from XML file.",valc); } - } - if (!strcmp(namec, "maxt")) { - maxt = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'maxt' from XML file.",valc); } - } - if (!strcmp(namec, "storage_stride")) { - storage_stride = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'storage_stride' from XML file.",valc); } - } - if (!strcmp(namec, "xml_storage_stride")) { - xml_storage_stride = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'xml_storage_stride' from XML file.",valc); } - } - if (!strcmp(namec, "rseed")) { - rseed = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'rseed' from XML file.",valc); } - } - if (!strcmp(namec, "constituous_expansion_limit")) { - constituous_expansion_limit = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'constituous_expansion_limit' from XML file.",valc); } - } - if (!strcmp(namec, "vessel_inh_level")) { - vessel_inh_level = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'vessel_inh_level' from XML file.",valc); } - } - if (!strcmp(namec, "vessel_expansion_rate")) { - vessel_expansion_rate = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'vessel_expansion_rate' from XML file.",valc); } - } - if (!strcmp(namec, "d")) { - d = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'd' from XML file.",valc); } - } - if (!strcmp(namec, "e")) { - e = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'e' from XML file.",valc); } - } - if (!strcmp(namec, "f")) { - f = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'f' from XML file.",valc); } - } - if (!strcmp(namec, "c")) { - c = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'c' from XML file.",valc); } - } - if (!strcmp(namec, "mu")) { - mu = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'mu' from XML file.",valc); } - } - if (!strcmp(namec, "nu")) { - nu = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'nu' from XML file.",valc); } - } - if (!strcmp(namec, "rho0")) { - rho0 = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rho0' from XML file.",valc); } - } - if (!strcmp(namec, "rho1")) { - rho1 = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rho1' from XML file.",valc); } - } - if (!strcmp(namec, "c0")) { - c0 = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'c0' from XML file.",valc); } - } - if (!strcmp(namec, "gamma")) { - gamma = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'gamma' from XML file.",valc); } - } - if (!strcmp(namec, "eps")) { - eps = standardlocale.toDouble(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'eps' from XML file.",valc); } - } - if (!strcmp(namec, "i1")) { - i1 = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i1' from XML file.",valc); } - } - if (!strcmp(namec, "i2")) { - i2 = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i2' from XML file.",valc); } - } - if (!strcmp(namec, "i3")) { - i3 = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i3' from XML file.",valc); } - } - if (!strcmp(namec, "i4")) { - i4 = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i4' from XML file.",valc); } - } - if (!strcmp(namec, "i5")) { - i5 = standardlocale.toInt(valc, &ok); - if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i5' from XML file.",valc); } - } - if (!strcmp(namec, "s1")) { - if (s1) { free(s1); } - s1=strdup(valc); - } - if (!strcmp(namec, "s2")) { - if (s2) { free(s2); } - s2=strdup(valc); - } - if (!strcmp(namec, "s3")) { - if (s3) { free(s3); } - s3=strdup(valc); - } - if (!strcmp(namec, "b1")) { - b1 = strtobool(valc); - } - if (!strcmp(namec, "b2")) { - b2 = strtobool(valc); - } - if (!strcmp(namec, "b3")) { - b3 = strtobool(valc); - } - if (!strcmp(namec, "b4")) { - b4 = strtobool(valc); - } - if (!strcmp(namec, "dir1")) { - if (dir1) { free(dir1); } - dir1=strdup(valc); - } - if (!strcmp(namec, "dir2")) { - if (dir2) { free(dir2); } - dir2=strdup(valc); +if (!strcmp(namec, "arrowcolor")) { + if (arrowcolor) { free(arrowcolor); } + arrowcolor=strdup(valc); +} +if (!strcmp(namec, "arrowsize")) { + arrowsize = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'arrowsize' from XML file.",valc); } +} +if (!strcmp(namec, "textcolor")) { + if (textcolor) { free(textcolor); } + textcolor=strdup(valc); +} +if (!strcmp(namec, "cellnumsize")) { + cellnumsize = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'cellnumsize' from XML file.",valc); } +} +if (!strcmp(namec, "nodenumsize")) { + nodenumsize = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'nodenumsize' from XML file.",valc); } +} +if (!strcmp(namec, "node_mag")) { + node_mag = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'node_mag' from XML file.",valc); } +} +if (!strcmp(namec, "outlinewidth")) { + outlinewidth = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'outlinewidth' from XML file.",valc); } +} +if (!strcmp(namec, "cell_outline_color")) { + if (cell_outline_color) { free(cell_outline_color); } + cell_outline_color=strdup(valc); +} +if (!strcmp(namec, "resize_stride")) { + resize_stride = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'resize_stride' from XML file.",valc); } +} +if (!strcmp(namec, "T")) { + T = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'T' from XML file.",valc); } +} +if (!strcmp(namec, "lambda_length")) { + lambda_length = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'lambda_length' from XML file.",valc); } +} +if (!strcmp(namec, "lambda_celllength")) { + lambda_celllength = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'lambda_celllength' from XML file.",valc); } +} +if (!strcmp(namec, "target_length")) { + target_length = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'target_length' from XML file.",valc); } +} +if (!strcmp(namec, "cell_expansion_rate")) { + cell_expansion_rate = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'cell_expansion_rate' from XML file.",valc); } +} +if (!strcmp(namec, "cell_div_expansion_rate")) { + cell_div_expansion_rate = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'cell_div_expansion_rate' from XML file.",valc); } +} +if (!strcmp(namec, "auxin_dependent_growth")) { +auxin_dependent_growth = strtobool(valc); +} +if (!strcmp(namec, "ode_accuracy")) { + ode_accuracy = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'ode_accuracy' from XML file.",valc); } +} +if (!strcmp(namec, "mc_stepsize")) { + mc_stepsize = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'mc_stepsize' from XML file.",valc); } +} +if (!strcmp(namec, "mc_cell_stepsize")) { + mc_cell_stepsize = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'mc_cell_stepsize' from XML file.",valc); } +} +if (!strcmp(namec, "energy_threshold")) { + energy_threshold = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'energy_threshold' from XML file.",valc); } +} +if (!strcmp(namec, "bend_lambda")) { + bend_lambda = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'bend_lambda' from XML file.",valc); } +} +if (!strcmp(namec, "alignment_lambda")) { + alignment_lambda = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'alignment_lambda' from XML file.",valc); } +} +if (!strcmp(namec, "rel_cell_div_threshold")) { + rel_cell_div_threshold = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rel_cell_div_threshold' from XML file.",valc); } +} +if (!strcmp(namec, "rel_perimeter_stiffness")) { + rel_perimeter_stiffness = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rel_perimeter_stiffness' from XML file.",valc); } +} +if (!strcmp(namec, "collapse_node_threshold")) { + collapse_node_threshold = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'collapse_node_threshold' from XML file.",valc); } +} +if (!strcmp(namec, "morphogen_div_threshold")) { + morphogen_div_threshold = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'morphogen_div_threshold' from XML file.",valc); } +} +if (!strcmp(namec, "morphogen_expansion_threshold")) { + morphogen_expansion_threshold = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'morphogen_expansion_threshold' from XML file.",valc); } +} +if (!strcmp(namec, "copy_wall")) { +copy_wall = strtobool(valc); +} +if (!strcmp(namec, "source")) { + source = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'source' from XML file.",valc); } +} +if (!strcmp(namec, "k1")) { + k1 = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'k1' from XML file.",valc); } +} +if (!strcmp(namec, "k2")) { + k2 = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'k2' from XML file.",valc); } +} +if (!strcmp(namec, "r")) { + r = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'r' from XML file.",valc); } +} +if (!strcmp(namec, "kr")) { + kr = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'kr' from XML file.",valc); } +} +if (!strcmp(namec, "km")) { + km = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'km' from XML file.",valc); } +} +if (!strcmp(namec, "Pi_tot")) { + Pi_tot = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'Pi_tot' from XML file.",valc); } +} +if (!strcmp(namec, "transport")) { + transport = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'transport' from XML file.",valc); } +} +if (!strcmp(namec, "ka")) { + ka = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'ka' from XML file.",valc); } +} +if (!strcmp(namec, "pin_prod")) { + pin_prod = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_prod' from XML file.",valc); } +} +if (!strcmp(namec, "pin_prod_in_epidermis")) { + pin_prod_in_epidermis = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_prod_in_epidermis' from XML file.",valc); } +} +if (!strcmp(namec, "pin_breakdown")) { + pin_breakdown = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_breakdown' from XML file.",valc); } +} +if (!strcmp(namec, "pin_breakdown_internal")) { + pin_breakdown_internal = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'pin_breakdown_internal' from XML file.",valc); } +} +if (!strcmp(namec, "aux1prod")) { + aux1prod = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1prod' from XML file.",valc); } +} +if (!strcmp(namec, "aux1prodmeso")) { + aux1prodmeso = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1prodmeso' from XML file.",valc); } +} +if (!strcmp(namec, "aux1decay")) { + aux1decay = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1decay' from XML file.",valc); } +} +if (!strcmp(namec, "aux1decaymeso")) { + aux1decaymeso = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1decaymeso' from XML file.",valc); } +} +if (!strcmp(namec, "aux1transport")) { + aux1transport = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux1transport' from XML file.",valc); } +} +if (!strcmp(namec, "aux_cons")) { + aux_cons = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux_cons' from XML file.",valc); } +} +if (!strcmp(namec, "aux_breakdown")) { + aux_breakdown = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'aux_breakdown' from XML file.",valc); } +} +if (!strcmp(namec, "kaux1")) { + kaux1 = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'kaux1' from XML file.",valc); } +} +if (!strcmp(namec, "kap")) { + kap = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'kap' from XML file.",valc); } +} +if (!strcmp(namec, "leaf_tip_source")) { + leaf_tip_source = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'leaf_tip_source' from XML file.",valc); } +} +if (!strcmp(namec, "sam_efflux")) { + sam_efflux = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'sam_efflux' from XML file.",valc); } +} +if (!strcmp(namec, "sam_auxin")) { + sam_auxin = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'sam_auxin' from XML file.",valc); } +} +if (!strcmp(namec, "sam_auxin_breakdown")) { + sam_auxin_breakdown = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'sam_auxin_breakdown' from XML file.",valc); } +} +if (!strcmp(namec, "van3prod")) { + van3prod = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'van3prod' from XML file.",valc); } +} +if (!strcmp(namec, "van3autokat")) { + van3autokat = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'van3autokat' from XML file.",valc); } +} +if (!strcmp(namec, "van3sat")) { + van3sat = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'van3sat' from XML file.",valc); } +} +if (!strcmp(namec, "k2van3")) { + k2van3 = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'k2van3' from XML file.",valc); } +} +if (!strcmp(namec, "dt")) { + dt = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'dt' from XML file.",valc); } +} +if (!strcmp(namec, "rd_dt")) { + rd_dt = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rd_dt' from XML file.",valc); } +} +if (!strcmp(namec, "datadir")) { + if (datadir) { free(datadir); } + datadir=strdup(valc); + datadir = AppendHomeDirIfPathRelative(datadir); +} +if (!strcmp(namec, "movie")) { +movie = strtobool(valc); +} +if (!strcmp(namec, "nit")) { + nit = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'nit' from XML file.",valc); } +} +if (!strcmp(namec, "maxt")) { + maxt = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'maxt' from XML file.",valc); } +} +if (!strcmp(namec, "storage_stride")) { + storage_stride = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'storage_stride' from XML file.",valc); } +} +if (!strcmp(namec, "xml_storage_stride")) { + xml_storage_stride = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'xml_storage_stride' from XML file.",valc); } +} +if (!strcmp(namec, "rseed")) { + rseed = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'rseed' from XML file.",valc); } +} +if (!strcmp(namec, "constituous_expansion_limit")) { + constituous_expansion_limit = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'constituous_expansion_limit' from XML file.",valc); } +} +if (!strcmp(namec, "vessel_inh_level")) { + vessel_inh_level = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'vessel_inh_level' from XML file.",valc); } +} +if (!strcmp(namec, "vessel_expansion_rate")) { + vessel_expansion_rate = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'vessel_expansion_rate' from XML file.",valc); } +} +if (!strcmp(namec, "d")) { + d = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'd' from XML file.",valc); } +} +if (!strcmp(namec, "e")) { + e = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'e' from XML file.",valc); } +} +if (!strcmp(namec, "f")) { + f = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'f' from XML file.",valc); } +} +if (!strcmp(namec, "c")) { + c = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'c' from XML file.",valc); } +} +if (!strcmp(namec, "mu")) { + mu = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'mu' from XML file.",valc); } +} +if (!strcmp(namec, "nu")) { + nu = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'nu' from XML file.",valc); } +} +if (!strcmp(namec, "rho0")) { + rho0 = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rho0' from XML file.",valc); } +} +if (!strcmp(namec, "rho1")) { + rho1 = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'rho1' from XML file.",valc); } +} +if (!strcmp(namec, "c0")) { + c0 = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'c0' from XML file.",valc); } +} +if (!strcmp(namec, "gamma")) { + gamma = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'gamma' from XML file.",valc); } +} +if (!strcmp(namec, "eps")) { + eps = standardlocale.toDouble(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to double while reading parameter 'eps' from XML file.",valc); } +} +if (!strcmp(namec, "i1")) { + i1 = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i1' from XML file.",valc); } +} +if (!strcmp(namec, "i2")) { + i2 = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i2' from XML file.",valc); } +} +if (!strcmp(namec, "i3")) { + i3 = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i3' from XML file.",valc); } +} +if (!strcmp(namec, "i4")) { + i4 = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i4' from XML file.",valc); } +} +if (!strcmp(namec, "i5")) { + i5 = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'i5' from XML file.",valc); } +} +if (!strcmp(namec, "s1")) { + if (s1) { free(s1); } + s1=strdup(valc); +} +if (!strcmp(namec, "s2")) { + if (s2) { free(s2); } + s2=strdup(valc); +} +if (!strcmp(namec, "s3")) { + if (s3) { free(s3); } + s3=strdup(valc); +} +if (!strcmp(namec, "b1")) { +b1 = strtobool(valc); +} +if (!strcmp(namec, "b2")) { +b2 = strtobool(valc); +} +if (!strcmp(namec, "b3")) { +b3 = strtobool(valc); +} +if (!strcmp(namec, "b4")) { +b4 = strtobool(valc); +} +if (!strcmp(namec, "dir1")) { + if (dir1) { free(dir1); } + dir1=strdup(valc); +} +if (!strcmp(namec, "dir2")) { + if (dir2) { free(dir2); } + dir2=strdup(valc); +} +if (!strcmp(namec, "export_interval")) { + export_interval = standardlocale.toInt(valc, &ok); + if (!ok) { MyWarning::error("Read error: cannot convert string \"%s\" to integer while reading parameter 'export_interval' from XML file.",valc); } +} +if (!strcmp(namec, "export_fn_prefix")) { + if (export_fn_prefix) { free(export_fn_prefix); } + export_fn_prefix=strdup(valc); +} +} +void Parameter::AssignValArrayToPar(const char *namec, vector valarray) { +if (!strcmp(namec, "D")) { + int i=0; + vector::const_iterator v=valarray.begin(); + while (v!=valarray.end() && i <= 14 ) { + D[i++]=*(v++); } } -void Parameter::AssignValArrayToPar(const char *namec, vector valarray) { - if (!strcmp(namec, "D")) { - int i=0; - vector::const_iterator v=valarray.begin(); - while (v!=valarray.end() && i <= 14 ) { - D[i++]=*(v++); - } +if (!strcmp(namec, "initval")) { + int i=0; + vector::const_iterator v=valarray.begin(); + while (v!=valarray.end() && i <= 14 ) { + initval[i++]=*(v++); } - if (!strcmp(namec, "initval")) { - int i=0; - vector::const_iterator v=valarray.begin(); - while (v!=valarray.end() && i <= 14 ) { - initval[i++]=*(v++); - } +} +if (!strcmp(namec, "k")) { + int i=0; + vector::const_iterator v=valarray.begin(); + while (v!=valarray.end() && i <= 14 ) { + k[i++]=*(v++); } - if (!strcmp(namec, "k")) { - int i=0; - vector::const_iterator v=valarray.begin(); - while (v!=valarray.end() && i <= 14 ) { - k[i++]=*(v++); - } - } +} } ostream &operator<<(ostream &os, Parameter &p) { - p.Write(os); - return os; + p.Write(os); + return os; } /* finis */