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Location: EI/VirtualLeaf/lib/libxml2/include/libxml/xmlsave.h - annotation
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In response to referee's comment:
"However, (although it is probably not important for model developers), I was
still unable to load the model ‘Meinhardt 1976 with growth’ example from the
‘Models’ drop down menu, I got the ‘Fatal error’ message ‘stepwise underflow in
rkqs, with h=0.000000 and htry = 0.100000’. The model did work when I selected
the Meinhardt model in both the Models and the File -> Read leaf menus together,
it would be preferable if the models loaded from the Models menu worked
automatically. I am not sure that the update referred to in the author’s
response permits the loading of ‘My First Model in Virtual Leaf’ from the
‘Models’ drop down menu; I only got a cell that wiggled."
I made the following changes:
- meinhardt_plugin now reads "meinhardt_init.xml" by default
- changed the name of 'My First Model in Virtual Leaf’ to '0: Empty model template (does nothing)' to make it clear that the wiggle cell is the intended behavior for this model example.
- Added default parameter files for Tutorial1A-D and Tutorial2 to prevent variable behavior depending on the last parameter settings used.
--
user: Roeland Merks <roeland.merks@cwi.nl>
branch 'default'
added data/leaves/tutorial1_init.xml
added data/leaves/tutorial2_init.xml
changed data/leaves/auxin_growth.xml
changed data/leaves/meinhardt_init.xml
changed src/TutorialCode/Tutorial0/tutorial0.cpp
changed src/TutorialCode/Tutorial1A/tutorial1A.h
changed src/TutorialCode/Tutorial1B/tutorial1B.h
changed src/TutorialCode/Tutorial1C/tutorial1C.h
changed src/TutorialCode/Tutorial1D/tutorial1D.h
changed src/TutorialCode/Tutorial2/tutorial2.h
changed src/build_models/meinhardtplugin.h
"However, (although it is probably not important for model developers), I was
still unable to load the model ‘Meinhardt 1976 with growth’ example from the
‘Models’ drop down menu, I got the ‘Fatal error’ message ‘stepwise underflow in
rkqs, with h=0.000000 and htry = 0.100000’. The model did work when I selected
the Meinhardt model in both the Models and the File -> Read leaf menus together,
it would be preferable if the models loaded from the Models menu worked
automatically. I am not sure that the update referred to in the author’s
response permits the loading of ‘My First Model in Virtual Leaf’ from the
‘Models’ drop down menu; I only got a cell that wiggled."
I made the following changes:
- meinhardt_plugin now reads "meinhardt_init.xml" by default
- changed the name of 'My First Model in Virtual Leaf’ to '0: Empty model template (does nothing)' to make it clear that the wiggle cell is the intended behavior for this model example.
- Added default parameter files for Tutorial1A-D and Tutorial2 to prevent variable behavior depending on the last parameter settings used.
--
user: Roeland Merks <roeland.merks@cwi.nl>
branch 'default'
added data/leaves/tutorial1_init.xml
added data/leaves/tutorial2_init.xml
changed data/leaves/auxin_growth.xml
changed data/leaves/meinhardt_init.xml
changed src/TutorialCode/Tutorial0/tutorial0.cpp
changed src/TutorialCode/Tutorial1A/tutorial1A.h
changed src/TutorialCode/Tutorial1B/tutorial1B.h
changed src/TutorialCode/Tutorial1C/tutorial1C.h
changed src/TutorialCode/Tutorial1D/tutorial1D.h
changed src/TutorialCode/Tutorial2/tutorial2.h
changed src/build_models/meinhardtplugin.h
bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 bc383c25c970 | /*
* Summary: the XML document serializer
* Description: API to save document or subtree of document
*
* Copy: See Copyright for the status of this software.
*
* Author: Daniel Veillard
*/
#ifndef __XML_XMLSAVE_H__
#define __XML_XMLSAVE_H__
#include <libxml/xmlversion.h>
#include <libxml/tree.h>
#include <libxml/encoding.h>
#include <libxml/xmlIO.h>
#ifdef LIBXML_OUTPUT_ENABLED
#ifdef __cplusplus
extern "C" {
#endif
/**
* xmlSaveOption:
*
* This is the set of XML save options that can be passed down
* to the xmlSaveToFd() and similar calls.
*/
typedef enum {
XML_SAVE_FORMAT = 1<<0, /* format save output */
XML_SAVE_NO_DECL = 1<<1, /* drop the xml declaration */
XML_SAVE_NO_EMPTY = 1<<2, /* no empty tags */
XML_SAVE_NO_XHTML = 1<<3, /* disable XHTML1 specific rules */
XML_SAVE_XHTML = 1<<4, /* force XHTML1 specific rules */
XML_SAVE_AS_XML = 1<<5, /* force XML serialization on HTML doc */
XML_SAVE_AS_HTML = 1<<6 /* force HTML serialization on XML doc */
} xmlSaveOption;
typedef struct _xmlSaveCtxt xmlSaveCtxt;
typedef xmlSaveCtxt *xmlSaveCtxtPtr;
XMLPUBFUN xmlSaveCtxtPtr XMLCALL
xmlSaveToFd (int fd,
const char *encoding,
int options);
XMLPUBFUN xmlSaveCtxtPtr XMLCALL
xmlSaveToFilename (const char *filename,
const char *encoding,
int options);
XMLPUBFUN xmlSaveCtxtPtr XMLCALL
xmlSaveToBuffer (xmlBufferPtr buffer,
const char *encoding,
int options);
XMLPUBFUN xmlSaveCtxtPtr XMLCALL
xmlSaveToIO (xmlOutputWriteCallback iowrite,
xmlOutputCloseCallback ioclose,
void *ioctx,
const char *encoding,
int options);
XMLPUBFUN long XMLCALL
xmlSaveDoc (xmlSaveCtxtPtr ctxt,
xmlDocPtr doc);
XMLPUBFUN long XMLCALL
xmlSaveTree (xmlSaveCtxtPtr ctxt,
xmlNodePtr node);
XMLPUBFUN int XMLCALL
xmlSaveFlush (xmlSaveCtxtPtr ctxt);
XMLPUBFUN int XMLCALL
xmlSaveClose (xmlSaveCtxtPtr ctxt);
XMLPUBFUN int XMLCALL
xmlSaveSetEscape (xmlSaveCtxtPtr ctxt,
xmlCharEncodingOutputFunc escape);
XMLPUBFUN int XMLCALL
xmlSaveSetAttrEscape (xmlSaveCtxtPtr ctxt,
xmlCharEncodingOutputFunc escape);
#ifdef __cplusplus
}
#endif
#endif /* LIBXML_OUTPUT_ENABLED */
#endif /* __XML_XMLSAVE_H__ */
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