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Location: EI/VirtualLeaf/lib/libxml2/include/libxml/xmlschemas.h - annotation
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In response to referee's comment:
"However, (although it is probably not important for model developers), I was
still unable to load the model ‘Meinhardt 1976 with growth’ example from the
‘Models’ drop down menu, I got the ‘Fatal error’ message ‘stepwise underflow in
rkqs, with h=0.000000 and htry = 0.100000’. The model did work when I selected
the Meinhardt model in both the Models and the File -> Read leaf menus together,
it would be preferable if the models loaded from the Models menu worked
automatically. I am not sure that the update referred to in the author’s
response permits the loading of ‘My First Model in Virtual Leaf’ from the
‘Models’ drop down menu; I only got a cell that wiggled."
I made the following changes:
- meinhardt_plugin now reads "meinhardt_init.xml" by default
- changed the name of 'My First Model in Virtual Leaf’ to '0: Empty model template (does nothing)' to make it clear that the wiggle cell is the intended behavior for this model example.
- Added default parameter files for Tutorial1A-D and Tutorial2 to prevent variable behavior depending on the last parameter settings used.
--
user: Roeland Merks <roeland.merks@cwi.nl>
branch 'default'
added data/leaves/tutorial1_init.xml
added data/leaves/tutorial2_init.xml
changed data/leaves/auxin_growth.xml
changed data/leaves/meinhardt_init.xml
changed src/TutorialCode/Tutorial0/tutorial0.cpp
changed src/TutorialCode/Tutorial1A/tutorial1A.h
changed src/TutorialCode/Tutorial1B/tutorial1B.h
changed src/TutorialCode/Tutorial1C/tutorial1C.h
changed src/TutorialCode/Tutorial1D/tutorial1D.h
changed src/TutorialCode/Tutorial2/tutorial2.h
changed src/build_models/meinhardtplugin.h
"However, (although it is probably not important for model developers), I was
still unable to load the model ‘Meinhardt 1976 with growth’ example from the
‘Models’ drop down menu, I got the ‘Fatal error’ message ‘stepwise underflow in
rkqs, with h=0.000000 and htry = 0.100000’. The model did work when I selected
the Meinhardt model in both the Models and the File -> Read leaf menus together,
it would be preferable if the models loaded from the Models menu worked
automatically. I am not sure that the update referred to in the author’s
response permits the loading of ‘My First Model in Virtual Leaf’ from the
‘Models’ drop down menu; I only got a cell that wiggled."
I made the following changes:
- meinhardt_plugin now reads "meinhardt_init.xml" by default
- changed the name of 'My First Model in Virtual Leaf’ to '0: Empty model template (does nothing)' to make it clear that the wiggle cell is the intended behavior for this model example.
- Added default parameter files for Tutorial1A-D and Tutorial2 to prevent variable behavior depending on the last parameter settings used.
--
user: Roeland Merks <roeland.merks@cwi.nl>
branch 'default'
added data/leaves/tutorial1_init.xml
added data/leaves/tutorial2_init.xml
changed data/leaves/auxin_growth.xml
changed data/leaves/meinhardt_init.xml
changed src/TutorialCode/Tutorial0/tutorial0.cpp
changed src/TutorialCode/Tutorial1A/tutorial1A.h
changed src/TutorialCode/Tutorial1B/tutorial1B.h
changed src/TutorialCode/Tutorial1C/tutorial1C.h
changed src/TutorialCode/Tutorial1D/tutorial1D.h
changed src/TutorialCode/Tutorial2/tutorial2.h
changed src/build_models/meinhardtplugin.h
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* Summary: incomplete XML Schemas structure implementation
* Description: interface to the XML Schemas handling and schema validity
* checking, it is incomplete right now.
*
* Copy: See Copyright for the status of this software.
*
* Author: Daniel Veillard
*/
#ifndef __XML_SCHEMA_H__
#define __XML_SCHEMA_H__
#include <libxml/xmlversion.h>
#ifdef LIBXML_SCHEMAS_ENABLED
#include <libxml/tree.h>
#ifdef __cplusplus
extern "C" {
#endif
/**
* This error codes are obsolete; not used any more.
*/
typedef enum {
XML_SCHEMAS_ERR_OK = 0,
XML_SCHEMAS_ERR_NOROOT = 1,
XML_SCHEMAS_ERR_UNDECLAREDELEM,
XML_SCHEMAS_ERR_NOTTOPLEVEL,
XML_SCHEMAS_ERR_MISSING,
XML_SCHEMAS_ERR_WRONGELEM,
XML_SCHEMAS_ERR_NOTYPE,
XML_SCHEMAS_ERR_NOROLLBACK,
XML_SCHEMAS_ERR_ISABSTRACT,
XML_SCHEMAS_ERR_NOTEMPTY,
XML_SCHEMAS_ERR_ELEMCONT,
XML_SCHEMAS_ERR_HAVEDEFAULT,
XML_SCHEMAS_ERR_NOTNILLABLE,
XML_SCHEMAS_ERR_EXTRACONTENT,
XML_SCHEMAS_ERR_INVALIDATTR,
XML_SCHEMAS_ERR_INVALIDELEM,
XML_SCHEMAS_ERR_NOTDETERMINIST,
XML_SCHEMAS_ERR_CONSTRUCT,
XML_SCHEMAS_ERR_INTERNAL,
XML_SCHEMAS_ERR_NOTSIMPLE,
XML_SCHEMAS_ERR_ATTRUNKNOWN,
XML_SCHEMAS_ERR_ATTRINVALID,
XML_SCHEMAS_ERR_VALUE,
XML_SCHEMAS_ERR_FACET,
XML_SCHEMAS_ERR_,
XML_SCHEMAS_ERR_XXX
} xmlSchemaValidError;
/*
* ATTENTION: Change xmlSchemaSetValidOptions's check
* for invalid values, if adding to the validation
* options below.
*/
/**
* xmlSchemaValidOption:
*
* This is the set of XML Schema validation options.
*/
typedef enum {
XML_SCHEMA_VAL_VC_I_CREATE = 1<<0
/* Default/fixed: create an attribute node
* or an element's text node on the instance.
*/
} xmlSchemaValidOption;
/*
XML_SCHEMA_VAL_XSI_ASSEMBLE = 1<<1,
* assemble schemata using
* xsi:schemaLocation and
* xsi:noNamespaceSchemaLocation
*/
/**
* The schemas related types are kept internal
*/
typedef struct _xmlSchema xmlSchema;
typedef xmlSchema *xmlSchemaPtr;
/**
* xmlSchemaValidityErrorFunc:
* @ctx: the validation context
* @msg: the message
* @...: extra arguments
*
* Signature of an error callback from an XSD validation
*/
typedef void (XMLCDECL *xmlSchemaValidityErrorFunc) (void *ctx, const char *msg, ...) LIBXML_ATTR_FORMAT(2,3);
/**
* xmlSchemaValidityWarningFunc:
* @ctx: the validation context
* @msg: the message
* @...: extra arguments
*
* Signature of a warning callback from an XSD validation
*/
typedef void (XMLCDECL *xmlSchemaValidityWarningFunc) (void *ctx, const char *msg, ...) LIBXML_ATTR_FORMAT(2,3);
/**
* A schemas validation context
*/
typedef struct _xmlSchemaParserCtxt xmlSchemaParserCtxt;
typedef xmlSchemaParserCtxt *xmlSchemaParserCtxtPtr;
typedef struct _xmlSchemaValidCtxt xmlSchemaValidCtxt;
typedef xmlSchemaValidCtxt *xmlSchemaValidCtxtPtr;
/*
* Interfaces for parsing.
*/
XMLPUBFUN xmlSchemaParserCtxtPtr XMLCALL
xmlSchemaNewParserCtxt (const char *URL);
XMLPUBFUN xmlSchemaParserCtxtPtr XMLCALL
xmlSchemaNewMemParserCtxt (const char *buffer,
int size);
XMLPUBFUN xmlSchemaParserCtxtPtr XMLCALL
xmlSchemaNewDocParserCtxt (xmlDocPtr doc);
XMLPUBFUN void XMLCALL
xmlSchemaFreeParserCtxt (xmlSchemaParserCtxtPtr ctxt);
XMLPUBFUN void XMLCALL
xmlSchemaSetParserErrors (xmlSchemaParserCtxtPtr ctxt,
xmlSchemaValidityErrorFunc err,
xmlSchemaValidityWarningFunc warn,
void *ctx);
XMLPUBFUN void XMLCALL
xmlSchemaSetParserStructuredErrors(xmlSchemaParserCtxtPtr ctxt,
xmlStructuredErrorFunc serror,
void *ctx);
XMLPUBFUN int XMLCALL
xmlSchemaGetParserErrors(xmlSchemaParserCtxtPtr ctxt,
xmlSchemaValidityErrorFunc * err,
xmlSchemaValidityWarningFunc * warn,
void **ctx);
XMLPUBFUN int XMLCALL
xmlSchemaIsValid (xmlSchemaValidCtxtPtr ctxt);
XMLPUBFUN xmlSchemaPtr XMLCALL
xmlSchemaParse (xmlSchemaParserCtxtPtr ctxt);
XMLPUBFUN void XMLCALL
xmlSchemaFree (xmlSchemaPtr schema);
#ifdef LIBXML_OUTPUT_ENABLED
XMLPUBFUN void XMLCALL
xmlSchemaDump (FILE *output,
xmlSchemaPtr schema);
#endif /* LIBXML_OUTPUT_ENABLED */
/*
* Interfaces for validating
*/
XMLPUBFUN void XMLCALL
xmlSchemaSetValidErrors (xmlSchemaValidCtxtPtr ctxt,
xmlSchemaValidityErrorFunc err,
xmlSchemaValidityWarningFunc warn,
void *ctx);
XMLPUBFUN void XMLCALL
xmlSchemaSetValidStructuredErrors(xmlSchemaValidCtxtPtr ctxt,
xmlStructuredErrorFunc serror,
void *ctx);
XMLPUBFUN int XMLCALL
xmlSchemaGetValidErrors (xmlSchemaValidCtxtPtr ctxt,
xmlSchemaValidityErrorFunc *err,
xmlSchemaValidityWarningFunc *warn,
void **ctx);
XMLPUBFUN int XMLCALL
xmlSchemaSetValidOptions (xmlSchemaValidCtxtPtr ctxt,
int options);
XMLPUBFUN int XMLCALL
xmlSchemaValidCtxtGetOptions(xmlSchemaValidCtxtPtr ctxt);
XMLPUBFUN xmlSchemaValidCtxtPtr XMLCALL
xmlSchemaNewValidCtxt (xmlSchemaPtr schema);
XMLPUBFUN void XMLCALL
xmlSchemaFreeValidCtxt (xmlSchemaValidCtxtPtr ctxt);
XMLPUBFUN int XMLCALL
xmlSchemaValidateDoc (xmlSchemaValidCtxtPtr ctxt,
xmlDocPtr instance);
XMLPUBFUN int XMLCALL
xmlSchemaValidateOneElement (xmlSchemaValidCtxtPtr ctxt,
xmlNodePtr elem);
XMLPUBFUN int XMLCALL
xmlSchemaValidateStream (xmlSchemaValidCtxtPtr ctxt,
xmlParserInputBufferPtr input,
xmlCharEncoding enc,
xmlSAXHandlerPtr sax,
void *user_data);
XMLPUBFUN int XMLCALL
xmlSchemaValidateFile (xmlSchemaValidCtxtPtr ctxt,
const char * filename,
int options);
XMLPUBFUN xmlParserCtxtPtr XMLCALL
xmlSchemaValidCtxtGetParserCtxt(xmlSchemaValidCtxtPtr ctxt);
/*
* Interface to insert Schemas SAX validation in a SAX stream
*/
typedef struct _xmlSchemaSAXPlug xmlSchemaSAXPlugStruct;
typedef xmlSchemaSAXPlugStruct *xmlSchemaSAXPlugPtr;
XMLPUBFUN xmlSchemaSAXPlugPtr XMLCALL
xmlSchemaSAXPlug (xmlSchemaValidCtxtPtr ctxt,
xmlSAXHandlerPtr *sax,
void **user_data);
XMLPUBFUN int XMLCALL
xmlSchemaSAXUnplug (xmlSchemaSAXPlugPtr plug);
#ifdef __cplusplus
}
#endif
#endif /* LIBXML_SCHEMAS_ENABLED */
#endif /* __XML_SCHEMA_H__ */
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