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* Added functionality for numerical output (CSV) format. See functions starting with "CSV" in mesh.cpp. External code hull.cpp is responsible for convex hull calculations.
- ToDo: adopt menu item "File->export cell areas" so user can choose a file name or set up periodic output of numerical data.
- ToDo: add parameters re: periodic numeric output to "<settings>" block of LeafML-file, so it becomes possible to set up numeric output interactively, then write the LeafML file and run the program in batch mode to retrieve periodic numeric output.
* Added new functionality to plugin interface. It becomes possible to define a default LeafML init file for a plugin. It is read whenever the model plugin is loaded.
- ToDo: define default LeafML files for all plugins, according to the LeafML files mentioned in the Plant Phys. tutorial.
user: Roeland Merks <merks@cwi.nl>
branch 'default'
added src/hull.cpp
added src/hull.h
changed src/TutorialCode/Tutorial0/tutorial0.pro
changed src/VirtualLeaf.cpp
changed src/VirtualLeaf.pro
changed src/build_models/auxingrowthplugin.cpp
changed src/build_models/auxingrowthplugin.h
changed src/canvas.cpp
changed src/canvas.h
changed src/mainbase.h
changed src/mesh.cpp
changed src/mesh.h
changed src/modelcatalogue.cpp
changed src/simplugin.cpp
changed src/simplugin.h
changed src/xmlwrite.cpp
- ToDo: adopt menu item "File->export cell areas" so user can choose a file name or set up periodic output of numerical data.
- ToDo: add parameters re: periodic numeric output to "<settings>" block of LeafML-file, so it becomes possible to set up numeric output interactively, then write the LeafML file and run the program in batch mode to retrieve periodic numeric output.
* Added new functionality to plugin interface. It becomes possible to define a default LeafML init file for a plugin. It is read whenever the model plugin is loaded.
- ToDo: define default LeafML files for all plugins, according to the LeafML files mentioned in the Plant Phys. tutorial.
user: Roeland Merks <merks@cwi.nl>
branch 'default'
added src/hull.cpp
added src/hull.h
changed src/TutorialCode/Tutorial0/tutorial0.pro
changed src/VirtualLeaf.cpp
changed src/VirtualLeaf.pro
changed src/build_models/auxingrowthplugin.cpp
changed src/build_models/auxingrowthplugin.h
changed src/canvas.cpp
changed src/canvas.h
changed src/mainbase.h
changed src/mesh.cpp
changed src/mesh.h
changed src/modelcatalogue.cpp
changed src/simplugin.cpp
changed src/simplugin.h
changed src/xmlwrite.cpp
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 | 2010-06-23 <guravage@caterpie.sen.cwi.nl>
* simitembase.cpp: Removed NULL assignments to unused variables.
* VirtualLeaf.cpp: Ditto.
* apoplastitem.cpp: Ditto.
* canvas.cpp: Ditto.
* cell.cpp: Ditto.
* cellbase.h: Ditto.
* forwardeuler.cpp: Ditto.
* mainbase.h: Ditto.
* nodeitem.cpp: Ditto.
* qcanvasarrow.h: Ditto.
* simitembase.cpp: Ditto.
* Makefile (clean): Add -f Makefile argument to each make invocation.
* VirtualLeaf-install.nsi: New gpl license text.
* VirtualLeaf.pro: Disabled console mode.
* mesh.cpp (Clear): Added parentheses to qDebug statments.
(TestIllegalWalls): Replaced qDebug().
* canvas.cpp (mouseReleaseEvent): Replaced qDebug() with cerr since qDebug complains about *node_set.
* wall.cpp (CorrectWall): Rplaced gDebug() with cerr in transform call and when printing *this.
2010-06-22 <guravage@caterpie.sen.cwi.nl>
* Makefile (tutorials): Add tutorials target.
2010-06-21 <guravage@caterpie.sen.cwi.nl>
* parameter.cpp: Added particular reassignment of datadir.
* canvas.cpp (gpl): Added GPL3 License text. Display detail text only if the source text file exists.
2010-06-18 <guravage@caterpie.sen.cwi.nl>
* canvas.cpp (gpl): Added gpl slot to display GPL license.
* VirtualLeaf.pro: Changed default LIBXML2DIR, LIBICONVDIR and LIBZDIR to corresponding distribution lib directories.
* libplugin.pro: Ditto.
* Makefile (clean): add if stmt not to `touch` on windows.
2010-06-17 <guravage@caterpie.sen.cwi.nl>
* VirtualLeaf.pro: Removed perl references.
* libplugin.pro: Ditto.
2010-06-15 <guravage@caterpie.sen.cwi.nl>
* VirtualLeaf.pro: Removed xmlwritecode.cpp from SOURCES list.
* xmlwrite.cpp (XMLSave): Removed references to XMLWriteLeafSourceCode and XMLWriteReactionsCode.
* xmlwrite.h (XMLIO): Ditto!
* mesh.cpp (findNextBoundaryNode): Initialize Node *next_boundary_node = NULL;
* xmlwrite.cpp (XMLReadSimtime): Removed unused variable cur
(XMLReadWalls): viz_flux need not be declared twice; default value of 0.0.
(XMLReadCells): Removed unused count variable.
(XMLReadSimtime): Removed unused cur variable.
(XMLRead): Removed unused v_str variable.
* simitembase.cpp (userMove): Use assignment merely to obviate compilation warning.
(SimItemBase) Ditto.
* qcanvasarrow.h (QGraphicsLineItem): Use assignment merely to obviate compilation warning.
* output.cpp (OpenWriteFile): Removed unused par variable.
* nodeitem.cpp (paint): Use assignment merely to obviate compilation warning.
* forwardeuler.cpp (odeint): Use assignment merely to obviate compilation warning.
* cell.cpp (DivideOverGivenLine): Use assignment merely to obviate compilation warning.
* canvas.cpp (FigureEditor): Use assignments merely to obviate compilation errors.
(mousePressEvent): Removed unused item variable.
* apoplastitem.cpp
(ApoplastItem): Removed unused par variable.
(OnClick): Use NULL assignment merely to obviate compilation warning.
* mainbase.h (MainBase): Use assignment merely to obviate compilation warning.
* cellbase.h (CellsStaticDatamembers): Use assignment merely to obviate compilation warning.
* cell.cpp: Wrapped diagnostic output in QDEBUG blocks.
* VirtualLeaf.cpp ditto.
* canvas.cpp ditto.
* cell.cpp ditto.
* data_plot.cpp ditto.
* forwardeuler.cpp ditto.
* mesh.cpp ditto.
* mesh.h
* random.cpp ditto.
* wall.cpp ditto.
* wallbase.cpp ditto.
* wallitem.cpp ditto.
2010-06-07 <guravage@caterpie.sen.cwi.nl>
* VirtualLeaf.pro: Removed explicit perl invocation to regerenerate parameter files.
* libplugin.pro: ditto.
2010-06-03 <guravage@caterpie.sen.cwi.nl>
* pardialog.h: Added default versions of this automatically generated file.
* pardialog.cpp: ditto.
* parameter.h: ditto.
* parameter.cpp: ditto.
* VirtualLeaf.pro: delete/generate parameter.{h,cpp}and pardialog.{h,cpp} only if perl is installed.
* libplugin.pro: dito.
* Makefile: Added top-level Makefile
2010-05-10 <guravage@caterpie.sen.cwi.nl>
* VirtualLeaf.pro: Added -fPIC option to QMAKE_CXXFLAGS.
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