title = Parameter values for The Virtual Leaf / title
label = <b>Visualization</b> / label
arrowcolor = white / string
arrowsize = 100 / double
textcolor = red / string
cellnumsize = 1 / int
nodenumsize = 1 / int
node_mag = 1.0 / double 
outlinewidth = 1.0 / double
cell_outline_color = forestgreen / string
resize_stride = 0 / int
label = / label
label = <b>Cell mechanics</b> / label
T = 1.0 / double
lambda_length = 100. / double
lambda_celllength = 0. / double
target_length = 60. / double 
cell_expansion_rate = 1. / double
cell_div_expansion_rate = 0. / double
auxin_dependent_growth = true / bool
ode_accuracy = 1e-4 / double
mc_stepsize = 0.4 / double
mc_cell_stepsize = 0.2 / double
energy_threshold = 1000. / double
bend_lambda = 0. / double
alignment_lambda = 0. / double
rel_cell_div_threshold = 2. / double
rel_perimeter_stiffness = 2 / double
collapse_node_threshold = 0.05 / double
morphogen_div_threshold = 0.2 / double
morphogen_expansion_threshold = 0.01 / double
copy_wall = true / bool
label = / label
label = <b>Auxin transport and PIN1 dynamics</b> / label
source = 0. / double
D = 0., 0.0, 0.0, 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0. / doublelist
initval = 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0. / doublelist
k1 = 1. / double
k2 = 0.3 / double
r = 1. / double
kr = 1. / double
#k3 = 1 / double
#k4 = 0.3 / double
km = 1. / double
Pi_tot = 1. / double
transport = 0.036 / double
ka = 1 / double
# d = 1e-06 / double
# e = 0.01 / double
# f = 10 / double
pin_prod = 0.001 / double
pin_prod_in_epidermis = 0.1 / double
pin_breakdown = 0.001 / double
pin_breakdown_internal = 0.001 / double
aux1prod = 0.001 / double
aux1prodmeso = 0. / double
aux1decay = 0.001 / double
aux1decaymeso = 0.1 / double
aux1transport = 0.036 / double
aux_cons = 0. / double
aux_breakdown = 0. / double
kaux1 = 1 / double
kap = 1 / double
leaf_tip_source = 0.001 / double
sam_efflux = 0.0001 / double
sam_auxin = 10. / double
# gf_prod = 1e-3 / double
# gf_decay = 1e-3 / double
sam_auxin_breakdown = 0 / double
#label = / label
#label = <b>miscellaneous</b> / label
van3prod = 0.002 / double
van3autokat = 0.1 / double
van3sat = 10 / double
k2van3 = 0.3 / double
#glvprod = 0.0 / double
#glvbreakdown = 0. / double
label = / label
label = <b>Integration parameters</b> / label
dt = 0.1 / double 
rd_dt = 1.0 / double
datadir = . / directory 
movie = false / bool
nit = 100000 / int
maxt = 1000. / double
storage_stride = 10 / int
xml_storage_stride = 500 / int
rseed = -1 / int
#label = / label
#label = <b>Parameters for new chemical</b> / label
#glvproduction = 0. / double
#glvdecay = 0. / double
#glvdiffthreshold = 0. / double
label = / label
label = <b>Meinhardt leaf venation model</b> / label
constituous_expansion_limit = 16 / int
vessel_inh_level = 1 / double
vessel_expansion_rate = 0.25 / double
d = 0. / double
e = 0. / double
f = 0. / double
c = 0. / double
mu = 0. / double
nu = 0. / double
rho0 = 0. / double
rho1 = 0. / double
c0 = 0. / double
gamma = 0. / double
eps = 0. / double
label = / label
label = <b>User-defined parameters</b> / label
k = 0., 0.0, 0.0, 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0. / doublelist
i1 = 0 / int
i2 = 0 / int
i3 = 0 / int
i4 = 0 / int
i5 = 0 / int
s1 =  / string
s2 =  / string
s3 =  / string
b1 = false / bool
b2 = false / bool
b3 = false / bool
b4 = false / bool
dir1 = . / directory
dir2 = . / directory
export_interval = 0 / int
export_fn_prefix = cell. / string