Files @ c6ad8e34e8eb
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Location: EI/VirtualLeaf/src/simplugin.h

Roeland Merks
In response to referee's comment:

"I am also afraid that

the ‘snapshot’ and the ‘Export cell data’ functions do not seem to work very
well in my hands, could the program be changed so that the correct file
extension (.jpg, .tif, .txt, .dat, .xls, .csv…) is given automatically."

I corrected the "export cell data" dialog (it did not actually write the file in the submitted version). Also we now assume default file extensions (.jpg for snapshot and .csv for data export) if none is given.

--
user: Roeland Merks <roeland.merks@cwi.nl>
branch 'default'
changed src/VirtualLeaf.pro
changed src/canvas.cpp
removed src/miscq.cpp
removed src/miscq.h
/*
 *
 *  $Id$
 *
 *  This file is part of the Virtual Leaf.
 *
 *  VirtualLeaf is free software: you can redistribute it and/or modify
 *  it under the terms of the GNU General Public License as published by
 *  the Free Software Foundation, either version 3 of the License, or
 *  (at your option) any later version.
 *
 *  VirtualLeaf is distributed in the hope that it will be useful,
 *  but WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *  GNU General Public License for more details.
 *
 *  You should have received a copy of the GNU General Public License
 *  along with the Virtual Leaf.  If not, see <http://www.gnu.org/licenses/>.
 *
 *  Copyright 2010 Roeland Merks.
 *
 */


#ifndef _SIMPLUGIN_H_
#define _SIMPLUGIN_H_

#include <QtPlugin>
#include <QMetaType>
#include "cellbase.h"
#include "wallbase.h"

class Parameter;

#include <QColor>
#include <QString>


class SimPluginInterface {

 public:
  virtual QString ModelID(void) = 0; 

  virtual ~SimPluginInterface() { }

  // Executed after the cellular mechanics steps have equillibrized
  virtual void CellHouseKeeping(CellBase *c) = 0;

  // Differential equations describing transport of chemicals from cell to cell
  virtual void CelltoCellTransport(Wall *, double *dchem_c1, double *dchem_c2) = 0;

  // Differential equations describing chemical reactions taking place at or near the cell walls
  // (e.g. PIN accumulation)
  virtual void WallDynamics(Wall *w, double *dw1, double *dw)  = 0;

  // Differential equations describing chemical reactions inside the cells
  virtual void CellDynamics(CellBase *c, double *dchem) = 0;

  // to be executed after a cell division
  virtual void OnDivide(ParentInfo *parent_info, CellBase *daughter1, CellBase *daughter2) = 0;

  // to be executed for coloring a cell
  virtual void SetCellColor(CellBase *c, QColor *color) = 0;

  // Number of chemicals
  virtual int NChem(void) = 0;

  // Default LeafML-file to be read after model startup
  virtual QString DefaultLeafML(void);
  
  // For internal use; not to be redefined by end users
  virtual void SetParameters(Parameter *pass_pars);// { par = pass_pars; }
  virtual void SetCellsStaticDatamembers (CellsStaticDatamembers *cells_static_data_members_of_main);

 protected:
  class Parameter *par;
};

Q_DECLARE_INTERFACE(SimPluginInterface, "nl.cwi.VirtualLeaf.SimPluginInterface/1.3") 
Q_DECLARE_METATYPE(SimPluginInterface *)

#endif

/* finis */